Metagenomics Workshop
1.1
Setting up your de.NBI Cloud SimpleVM instance
Command Line Introduction: Excercises
The Tutorial Data Set
FastQC Quality Control
Assembly
Assembly Evaluation
Read Mapping
MetaQUAST
Binning
Classification
Data submission to ENA
Nextflow / nf-core
Metagenomics Workshop
Assembly Evaluation
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Assembly Evaluation
We are going to evaluate our assemblies using the reference genomes.
Read Mapping
MetaQUAST